Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKHYDYIAIGGGSGGIASINRAAMHGAKCAL---IEPK------FLGGTCVNVGCVPKKVMWYGAQIKEAMDLYADAYGYQV--DASFNFQKLVENREAYIERIRGSYKNGLDNNNVDWIKGYAEFVDEKTLRV-----NGELVTADHILIATGGEPALPS-IPGA-EFGITSDGFFALKELPKKVAVVGAGYIAVELAGVLQQLGSETHLFVRKHAPLRNFDPLLTDTLTEIIEQSDMTLHKHAIPQKVEKNPDGSLTLSLED---GR--TETVDTLIWAIGRKPVIKGLQIEKSGVEL-LESGHIAVDKFQNTNVAGIYAVGDVT-GHYELTPVAIAAGRRLSERLFNNKKDAHLNYENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDH-REPCRMKLIC-EGKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK |
| 1ZDL Chain:A ((31-500)) | --QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLM-HQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATGGRPRYPTQVKGALEYGITSDDIFWLKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPKNQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLF-GKSSTLMDYSNVPTTVFTPLEYGCVGLSEEEAVALHGQEHVEVYHAYYKPLEFTVADRDASQCYIKMVCMREPPQLVLGLHFLGPNAGEVTQGFALGIKCGASYAQVMQTVGIHPTCSEEVVKL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243802 for 3792 contacts (-64.3/contact) +
2D Compatibility (PS) -47438 + (NN) 1373 + (LL) 496
1D Compatibility (HY) -36800 + (ID) 9250
Total energy: -335421.0 ( -88.45 by residue)
QMean score : 0.467
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