Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNNKTSWIEELKEKRMAYGLSQNKLAVASGITRQYLSDIENEKVIPTEQVKTALLDSLERFNPDNPLEMLFDYVRIRFPTDNVEKIIEEILHLNIDYMIHEDFGYYSYPEHYRFGDIMVMVSYDITKGVLLELKGKGCRQYENFLLAQHRSWYDFFTDCLEVNGVFKRLDLAINDKVGILDIPELARKSEQEECISIFRTFKNYRSGELVHRDEKSDMGNTLYIGSLKSEVYFCIYEKDYEQFIKNDIPLEDPEVKNRFEIRLKNDRATHAIQDLLAYRNAEKTAFEIINRYIRFADKDTTKRRSQWQTSERWEWFIGKNRGELRLTTKPEPYSYERTLNWLRHQVAPTLKVASILDVLNETDIIPAMIRDANLTEKHEKLIEQQNLAVEDVIV |
| 2R1J Chain:L ((3-59)) | ---TQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R1J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5746 for 383 contacts (-15.0/contact) +
2D Compatibility (PS) -6589 + (NN) -3507 + (LL) 25056
1D Compatibility (HY) -800 + (ID) 550
Total energy: 7864.0 ( 20.53 by residue)
QMean score : 0.635
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