Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLDL------------QNGAVVDVGGGTTGISVFE--NGEVI--Y-TADEPTGGTHMTLVLAGYYGVP-------------------VEEAEQNKRAQKD----------------------SSEHFSVMRPVVEKMAEITRVHLEKS-----PSEPLYIVGGASAYSQFKDTFESYLKMPVFQPNYPQYVTPLGIAMSSGSENL |
| 3D2F Chain:A ((117-388)) | -------------------------------------------------------------------------QLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59377 for 1523 contacts (-39.0/contact) +
2D Compatibility (PS) -21504 + (NN) -8347 + (LL) 5912
1D Compatibility (HY) -4400 + (ID) 1800
Total energy: -89516.0 ( -58.78 by residue)
QMean score : 0.430
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