Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4NOY Chain:F ((1-75))
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNWTVLLDVEGKQQLVFKHAISTFSPQKNVALNPD--
General information:
TITO was launched using:
RESULT:
Template:
4NOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39229 for 451 contacts (-87.0/contact) +
2D Compatibility (PS) -8133 + (NN) -1417 + (LL) 248
1D Compatibility (HY) -11200 + (ID) 3650
Total energy: -63381.0 ( -140.53 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_4NOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NOY-query.scw
PDB file :
Tito_Scwrl_4NOY.pdb
: