Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------VKKNLRMLALGFLISAVVLLVYNQFFSTQTKADETKATSTKAGSDENSSTWKNKYEKLLAQQEVDKATE-----------------------------------AEAKKKAEEDAKKKAEEAKKV-KSYTLKISKGDPSSKAGDELQANGIIK----SASDFDKYLRDNDYEKYIRDGSYNLKSDMSYETIAKILTHKN-------- |
| 4HHT Chain:A ((1-229)) | GIDELYKKEFGIVAGVDEASRGCLAGPVVAAAVVLEKEIEGINDSRLLDEIMEKAAVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKG---LISENRFERILNLLGARKSVVFRKER |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 55846 for 1134 contacts (49.2/contact) +
2D Compatibility (PS) -16897 + (NN) -5200 + (LL) -16
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: 26783.0 ( 23.62 by residue)
QMean score : 0.227
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