Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKLTKIQETLGKEKIEAVLVTSEFNRRYVSGFTGTSGVALILPEKAYFVTDFRYTEQAAKQAEGYEIVQHTGPIFDTVEDLLIKNDTKTLHFEADYVTVSEFKQMERVFNRQLIPLTGFFEEMRKVKTASELKAIRTACDIADAAFAHIIQFIKPGMAEIEVSNELEFFMRRAGATSSSFDTIVASGIRSALPHGVASDKKIEVGDFVTMDYGCYYDGYCSDMTRTIAV-GEPAEKLKEIYQITLDAQLKVIDSLKPGMTGIEADA-IAR-----------------DYISSFGYGDAFGHSLGHGIGLEIHEGPNLSFKSPQKLEVGHVVTDEPGIYLP----------GIGGVRIEDDLLITETGNEIL----IHSPKELIIL |
| 1A16 Chain:A ((162-430)) | -----------------------------------------------------------------------------------------------------------------MIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGI-GIRIEDDIVITETGNENLTASVVKKPEEI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93652 for 1933 contacts (-48.4/contact) +
2D Compatibility (PS) -25581 + (NN) -12396 + (LL) 9588
1D Compatibility (HY) -16400 + (ID) 4200
Total energy: -142641.0 ( -73.79 by residue)
QMean score : 0.425
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