Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDSGVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKED-KWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKDNNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNK-SPISLANVKQGTICSDIIYNPAETAFLKEAKKNG-AITQNGLPMFVNQGALAFEIWTGIKP-ERSLMKEAVLEQLGGN
3PGJ Chain:D ((29-293))IDQYAVFGNPINHSKSPFIHTLFARQTQQSMIYTAQCVPVDGFTEAAKHFFAQGGRGCNVTVPFKEEAYRFADRLTERARLAGAVNTLKKLDDGEILGDNTDGEGLVQDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQLKQSYDVIINSTSASLDGELPAIDPVIFSSR---SVCYDMMYGKGYTVFNQWARQHGCAQAIDGLGMLVGQAAESFMLWRGLRPGTKQILRE---------


General information:
TITO was launched using:
RESULT:

Template: 3PGJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75775 for 2268 contacts (-33.4/contact) +
2D Compatibility (PS) -28202 + (NN) -11266 + (LL) 500
1D Compatibility (HY) -14800 + (ID) 4200
Total energy: -133743.0 ( -58.97 by residue)
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_3PGJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PGJ-query.scw
PDB file : Tito_Scwrl_3PGJ.pdb: