Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPLILIILGSVLCGCLIIFFLN-IAKSRGMKKKVKQLTTEKAELERQLAAAKAMKTHSSKVEKRDTENAVDTTK
1TAC Chain:? ((1-86))
LDPVD--------------------PNIEPW--NHPGSQPKTASNRAHAKKSAYHSQVAFITKGLGISYGRKKRRQRRRPSQGGQTHQDPIPKQPSSQPRGDPTGPKE-------
General information:
TITO was launched using:
RESULT:
Template:
1TAC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11009 for 572 contacts (-19.2/contact) +
2D Compatibility (PS) -7838 + (NN) 5549 + (LL) 3728
1D Compatibility (HY) 6400 + (ID) 600
Total energy: -3770.0 ( -6.59 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_1TAC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TAC-query.scw
PDB file :
Tito_Scwrl_1TAC.pdb
: