Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPKTEVVSMPGVFQYPLHELEEEMRVVESLGIKAVILFG---IPAEKDAVGTQAYHDHGIIQEATRLIKKSFPKILVVADTCLCEFTDHGHCGVI-ENGEILNDESLELLKQTAVSQAAAGADIIAPSNMMDGFVQVIREGLDEAGF-YDIPIMSYAVKYASAFYGPFRDAAGSAPQFGDRKSYQMDPANREEALREAKSDEQEGADFLIVKPSLSYLDIMRDVKN-NTNLPVVAYNVSGEYAMVKAAAQNGWIDEEKIVIEMLTSMKRAGATLIITYFAKDVSKYLNK |
1EB3 Chain:A ((24-340)) | -------HPLLRQWQSERQLTKNM------LIFPLFISDNPDDFTEIDSLPNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYIICDVCLCEYTSHGHCGVLYDDGTINRERSVSRLAAVAVNYAKAGAHCVAPSDMIDGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPAGRGLARRALERDMSEGADGIIVKPSTFYLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIAFESHQGFLRAGARLIITYLAPEFLDWLDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187486 for 2686 contacts (-69.8/contact) +
2D Compatibility (PS) -34139 + (NN) -16081 + (LL) 780
1D Compatibility (HY) -25600 + (ID) 6850
Total energy: -269376.0 ( -100.29 by residue)
QMean score : 0.592
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