Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKKTPFIISGIGLLGFIFFMTGVMTGAKWIQRFDHYWNSVIRVGITDTKTTVISYLTDIGGVATICILTAIIIIVF-------VFMR---------KVDTAIWFGSIVLIGGALIPSII-------KNIV--QRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRSWLRFTIGILALGIVIFVMYS-----------RVYLGVH----------FP------SDVVAGFLIGNAA----LFSGIGCYFIWNEKLALWANKFKKA--------------------------------------------- |
| 1TKI Chain:A ((18-338)) | KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFG-QARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKVIRTLKHRRYYHTLIKKDLNMVVSAARISCGGAIRSQKGVSVAKVKVASI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202758 for 1398 contacts (-145.0/contact) +
2D Compatibility (PS) -22017 + (NN) 24 + (LL) -172
1D Compatibility (HY) -6000 + (ID) 1400
Total energy: -232323.0 ( -166.18 by residue)
QMean score : -0.001
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