Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISGLSHITLIVKDLNKTTTFLREIFNAEEIYSSGDQTFSLSKEKFFLIAGLWICIMEGDSLQ----EQTYNHIAFRIQSEEVDEYIERIKSLGVEIKPERPRVEGEGRSIYFYDFDNHLFELHAGTLEERLKRYHE
4IR0 Chain:B ((3-131))
-LQGINHICFSVSNLEKSIEFYQKILQAKLLVKG-------RKLAYFDLNGLWIALNVEEDIPRNEIKQSYTHMAFTVTNEALDHLKEVLIQNDVNILPGRERDERDQRSLYFTDPDGHKFEFHTGTLQNRLEYYKE
General information:
TITO was launched using:
RESULT:
Template:
4IR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60252 for 792 contacts (-76.1/contact) +
2D Compatibility (PS) -13518 + (NN) -2134 + (LL) 412
1D Compatibility (HY) -10800 + (ID) 2300
Total energy: -88592.0 ( -111.86 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4IR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IR0-query.scw
PDB file :
Tito_Scwrl_4IR0.pdb
: