Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGM---FKVPTIMEQ--------------
2E6Q Chain:A ((1-112))
GSSGSSGTARLVAGLEDVQVYDGEDAVFSLDLSTIIQGTWFLNGEELKSNEPEGQV--EPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPGVQDSAALTIQESSGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2E6Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 131 for 568 contacts (0.2/contact) +
2D Compatibility (PS) -9911 + (NN) 2567 + (LL) 128
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -10735.0 ( -18.90 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_2E6Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E6Q-query.scw
PDB file :
Tito_Scwrl_2E6Q.pdb
: