Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEELLKRFTKYVKVDTQSNEESTVCPTTPGQMELANILVTELKEIGMQEVTVD--------EFGYVMATLPSNSTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGKDIILNKDLNVVLSPKQFPELAGYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINHPEIKHGKIRIAFTPDEEIGR-GPERFDVEAFGAKYAYTMDGG-PLGELEYESFNAASAKITFKGNSVHPGTAKNKMVNAVKMAMEFDARIPKDEAPEYTEGYEGFYHLISLNG------DVEQARSYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEIVDIVSAAMRNLDIEPKISPIRGGTDGAQLSYKGLPTPNIFGGGENFHGKFEYVALESMVKATEVIIEVARLFEEKE |
| 3RZA Chain:A ((23-394)) | -EQRLLNTFLELVQIDSETGNE----------STIQPILKEKFIALGLD-VKEDEAAKHPKLGANNLVCTMNSTIE--VPKLYLTSHMDTVVPA--IN-----VKPIVK-------------------------DDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQI-PHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHAS-TPKEGVSAINIAAKAISRMKLGQVD-----EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELG-GKAEVTVEQSYPGFK--INDNEAVVKIAQESARNLGLSANTIISGGGSDGSIINTFGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90559 for 3145 contacts (-28.8/contact) +
2D Compatibility (PS) -38236 + (NN) -20915 + (LL) 3252
1D Compatibility (HY) -11200 + (ID) 3850
Total energy: -161508.0 ( -51.35 by residue)
QMean score : 0.607
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