Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPRVKGGTVTRKRRKKIVKLAKGYYGSKHLLFKVANQAVMKSYQYAYRDRRQKKRDFRRLWIARINAAARMQDLSYSKLMHGLKLAGIDINRKMLADLAVNDIASFNTLADSAKKALAK
2GHJ Chain:A ((18-116))
-------------------LAKGYRGQRSRSYRRAKEAVMRALYYQYRDRKLRKREFRRLWIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADMAVRDPQAFEQVVNKVKEALQ-
General information:
TITO was launched using:
RESULT:
Template:
2GHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22116 for 564 contacts (-39.2/contact) +
2D Compatibility (PS) -10999 + (NN) -5532 + (LL) 1392
1D Compatibility (HY) -8000 + (ID) 2550
Total energy: -47805.0 ( -84.76 by residue)
QMean score : 0.544
(partial model without unconserved sides chains):
PDB file :
Tito_2GHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GHJ-query.scw
PDB file :
Tito_Scwrl_2GHJ.pdb
: