Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARYRKVDEDFFEEL----EEILIGADVGFETVMELVDTLRREVQLR--------NISDPKDVQEVIVEKLVEIYQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK |
3DM5 Chain:A ((4-313)) | -----------------------DNLGKALANTLKKI----ARASSVDEALIKELVRDIQRALIQADVNVRLVLQLT----REIQRRALEEKPPAGISKKEHIIKIVYEELTKFLGTEAK---PIEIKEKP-TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIH------PHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158324 for 2369 contacts (-66.8/contact) +
2D Compatibility (PS) -30466 + (NN) -16050 + (LL) 3372
1D Compatibility (HY) -22400 + (ID) 5450
Total energy: -229318.0 ( -96.80 by residue)
QMean score : 0.529
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