Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARYRKVDEDFFEEL----EEILIGADVGFETVMELVDTLRREVQLR--------NISDPKDVQEVIVEKLVEIYQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFRAGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADILLCDTAGRLQNKVNLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLDGTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK
3DM5 Chain:A ((4-313))-----------------------DNLGKALANTLKKI----ARASSVDEALIKELVRDIQRALIQADVNVRLVLQLT----REIQRRALEEKPPAGISKKEHIIKIVYEELTKFLGTEAK---PIEIKEKP-TILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRPGAYHQLRQLLDRYHIEVFGNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMKQISNVIH------PHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLL--------


General information:
TITO was launched using:
RESULT:

Template: 3DM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -158324 for 2369 contacts (-66.8/contact) +
2D Compatibility (PS) -30466 + (NN) -16050 + (LL) 3372
1D Compatibility (HY) -22400 + (ID) 5450
Total energy: -229318.0 ( -96.80 by residue)
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_3DM5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DM5-query.scw
PDB file : Tito_Scwrl_3DM5.pdb: