Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLEIEVQGAMQVRKAMP--EGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMM--ASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ
2QOR Chain:A ((9-199))
-MARIPPLVVCGPSGVGKGTLIKKVLSEFPSRFRFSISCTTRNKREKETNGVDYYFVDKDDFERKLKEGQFLEFDKYANNFYGTLKSEYDLAVGEGKICLFEMNINGVKQLKESKHIQDGIYIFVKPPSIDILLGRLKNRNTEKPEEINKRMQELTREMDEADKVGFNYFIVNDDLARTYAELREYLLGSYP-----------------
General information:
TITO was launched using:
RESULT:
Template:
2QOR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56511 for 1402 contacts (-40.3/contact) +
2D Compatibility (PS) -20898 + (NN) -11251 + (LL) 1900
1D Compatibility (HY) -13600 + (ID) 3150
Total energy: -103510.0 ( -73.83 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_2QOR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QOR-query.scw
PDB file :
Tito_Scwrl_2QOR.pdb
: