Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFQLVATAASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSAIARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKSTLYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQIWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGERLED---------------------EEAVRQLYREMGIVYKRMPTWSVYVLTSYELFEEVYGKKATKKRKLYNGYLRTDLYQYWGPRKPRPKKED |
2B3T Chain:A ((94-240)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTECLVEQALARLP-EQPCRILDLGTGTGAIALALASERP--------------------------------------DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALV--SGGFLLLEHGW----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63580 for 948 contacts (-67.1/contact) +
2D Compatibility (PS) -14240 + (NN) -10239 + (LL) 18136
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -74073.0 ( -78.14 by residue)
QMean score : 0.487
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