Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGI-----IIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYL------------YNGPKEVYY-------------VLTGKNSK-----------NKNIIVWVPKKKSDKVYVKFASDGITEQQARDKV------------TKEKKPKKILHVNLG-MEKETPIWEV--AYLDKNDKLNYFDINFETG-------EWYREIENL-- |
4PHR Chain:A ((1-277)) | SEFELMKRLSEIKVLPILESLKYIKHNHASVVRFGDGEIDL-MTGHSIPYQDYNEKLAKRLQQILQTKSDEKLLVCLPDVFSNMDRYNQNARHFWERHFLKYSEFYLNCCDAPFYGSTFISRPYIDLIDKSPSEAYFESLKELWRGKDLLIVEGATSRSGVGNDLFVAASSIKRLVCPSKNAFQYYDEILR--LTEKNAKNRLILVMLGPTAKVLVADLTTKGYQAIDLGHIDSEYEWYEMGATYKVKLTNKHTAEFNYDEGIELEFSQEYQEQIVARIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5108 for 1198 contacts (-4.3/contact) +
2D Compatibility (PS) -20314 + (NN) -1770 + (LL) -144
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -37936.0 ( -31.67 by residue)
QMean score : 0.192
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