Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYFDHAATTKMSEAALEVFMSASREFFANSESLHDAGTKSAALLEKCRGSFAEILHVPSRGIMFTSGGTESNQIAIQTLLHS--------TKKKEVLVSPLEHASVWQQLEALEE-AGACWLRLLPVDA-FGRVDPAVLSDMISPDTGLVIIQHVNSEIGSIQPIRELAHIAKQA----------GVYFHTDIVQSFGKLDLTL--DDVTSFSISSHKIYGPKGAGLLFIKPDVPMQVPL---PNVHHEFGFRPGTVNVPAIAAFTTAAYDIMGNREKEARRIAELKKAICEALTAK--VKVEGG-----LNTSPFILGITLPNMQ--GQEALLALNEADIQISTTSACSLRDP-APSRTLLATGKTIEEASRFIRLSFGRENELSDSLIFKKELDKLLRKR |
| 3A9Z Chain:A ((19-427)) | KVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ-TRPHFITCTVEHDSIRLPLEHLVEDQVAE-VTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQ--CQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166148 for 3249 contacts (-51.1/contact) +
2D Compatibility (PS) -40115 + (NN) -24835 + (LL) 232
1D Compatibility (HY) -14800 + (ID) 5100
Total energy: -250766.0 ( -77.18 by residue)
QMean score : 0.505
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