Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKERVIIVGSGISGCTAALRLMQDYDVTIITKGYKEESNSMLAQGGVAAAVS--KNDTPKKHFSDTFQAGCFHNKVLAVNQLVTHGPMVIQKLIAEGMAFDE-QDGELALGLEGAHQLPRILHTGG---------DQTGKFL--TTFLQEKLTDIHWQEQKMAIEIIKQNDSAIGVHCLDKEN-RLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAIMTDVHPRA-DLAPRDIVAATLFAEIQDG-------NEVFLDITAIP--NFEKRFPGIT------ANLDAHHIPFRETKRIPVHPGAHFLMGGIRTDLSGKT---------NIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYIRTQKINPIDHPEIPLSNQIQTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTDFDYANHTRKTAEISHMLITAKLIAESALKRTESLGAHRILKGVIK |
| 1YQ4 Chain:A ((42-425)) | -------------------------FNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIHYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQ--FGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRTYFSCTSAHTSTGDGTAMVTRAGLPCQDLEFVQFHPTGIYGAG-C--LITEGCRGEGGILINSQGERFMERYAPVAKDLASRDVVSRSMTIEIREGRGCGPEKDHVYLQLHHLPPQQLATRLPGISETAMIFAGVDVTKEP------IPVLPTVHYNMGGIPTNYKGQVITHVNGEDKVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACA-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124117 for 2983 contacts (-41.6/contact) +
2D Compatibility (PS) -35922 + (NN) -4347 + (LL) 11268
1D Compatibility (HY) -21200 + (ID) 6450
Total energy: -180768.0 ( -60.60 by residue)
QMean score : 0.410
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