Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LLKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDN-GTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAITK
1P3H Chain:A ((4-98))
NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVS
General information:
TITO was launched using:
RESULT:
Template:
1P3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17552 for 598 contacts (-29.4/contact) +
2D Compatibility (PS) -10067 + (NN) -811 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 2550
Total energy: -40180.0 ( -67.19 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1P3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3H-query.scw
PDB file :
Tito_Scwrl_1P3H.pdb
: