Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFLSDMEITKNIGEGEHTIYSILGQKA--DLVFFTLRDSLEALNEVENRFNKLAIADYLLPTYSYISVVELSNYLASHMAGGDDPYQNKGVRARL--YPALPPKKHICFYPMSKKRDGADNWYMLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTEMRFDEASARYAE-FGSFFIGNLLLSEQLSKLFTI |
| 3NN1 Chain:A ((6-240)) | -REKLLTESGVYGTFATFQMDHD-WWDLPGESRVISVAEVKGLVEQWS-----GKILVESYLLRGLSDHADLMFRVHARTLSDTQQFLSAFMGTRLGRHLTSGGLLHGVSKKPTYVAGFPE---------SMKTELQVNGESGSRPYAIVIPIKK----DAEWWALDQEARTALMQEHTQAALPYLKTVKRKLYHSTGLDDVDFITYFETERLEDFHNLVRALQQVKEFRHNRRFGHPTLLGTMSPLDEILEKFA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96418 for 1727 contacts (-55.8/contact) +
2D Compatibility (PS) -24885 + (NN) -9332 + (LL) 476
1D Compatibility (HY) -6000 + (ID) 1900
Total energy: -138059.0 ( -79.94 by residue)
QMean score : 0.472
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