Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGIFIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAIIIIFQPELRRALETLGRGNIFTRYGSRIEREQHHLIESIEKSTQYMAKRRIGALISVAR-DTGMDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVIIKGN--EIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGGELFRDVSEEELHKILLKELVTVTAKKPSIFSKWKGGKSE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
3C1Y Chain:A ((27-375)) | --------------------------------------------------------------------------------VPQELIEKIKLISPGT------------------ELRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYELS-----KMDGAIVLSEDITKIYYANVHLVPDPTI-PTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVLELENRVTLADVVRTLAKGFELLRIVEEIRPYIVELGEEGRLARMQLRELTEDVDDLLVLLIMDYSSEEVEEETAQNILQDFITRREPSPISISRVLGYDVQQAAQLDDVLVSARGYRLLKTVARIPLSIGYNVVRMFKTLDQISKASVEDLKKVEGIGEKRARAISESISSLKHRKT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72943 for 1199 contacts (-60.8/contact) +
2D Compatibility (PS) -18512 + (NN) -8696 + (LL) 10836
1D Compatibility (HY) -8000 + (ID) 1850
Total energy: -99165.0 ( -82.71 by residue)
QMean score : 0.399
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