Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLYTSPSCTSCRKARAWLEEHDIPYKERNIFSEPLSLDEIKEILRMTEDGTDEIISTRSKTFQKLNVDLD-SLPLQQLFELIQKNPGLLRRPIIIDEKRLQVGYNEDEIRRFLPRRVRTYQLREAQKMVN
2KOK Chain:A ((6-119))
SVTIYGIKNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKTV--PWEQLLNRAGTTFRKLPEDVRSNVDAASARELMLAQPSMVKRPVLERDGKLMVGFKPAQYEAYFK----------------
General information:
TITO was launched using:
RESULT:
Template:
2KOK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53919 for 719 contacts (-75.0/contact) +
2D Compatibility (PS) -12551 + (NN) -7960 + (LL) 1812
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -83268.0 ( -115.81 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2KOK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KOK-query.scw
PDB file :
Tito_Scwrl_2KOK.pdb
: