Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLKG
3TT7 Chain:F ((4-191))---IPTVI--------AYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKILT-------


General information:
TITO was launched using:
RESULT:

Template: 3TT7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118718 for 1358 contacts (-87.4/contact) +
2D Compatibility (PS) -19609 + (NN) -8862 + (LL) 536
1D Compatibility (HY) -23600 + (ID) 6950
Total energy: -177203.0 ( -130.49 by residue)
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_3TT7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TT7-query.scw
PDB file : Tito_Scwrl_3TT7.pdb: