Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTGKTFTVSNVIQEVNKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYVPQSDTYIEKDASINDEIDKLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVSLRVGMEISRDQLLRKLVDIQYDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFGDEIERIREVDALTGEIIGEREHVSIFPASHFVTRPDIMKKAIVNIKAELEDRLKVLRADNKLLEAQRLEQRTNYDLEMMEEMGYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQMVIDESHVTMPQIRGMFNGDQARKQMLVDHGFRLPSALDNRPLRLEEFEKHINQIMFISATPGPYELEKNPDVIEQIIRPTGLLDPIVEIRPIQGQIDDLMDEINDRVEKNERVLITTLTKKMSEDLTNYLKEAGVKVQYLHSEVKTLERIEIIRDLRLGVYDVIVGINLLREGIDLPEVSLVA-------ILDADKEGFLRSERSLIQTMGRAAR-NENGRVIMYADKMTDSMRNSIGETERRR-KIQIEYNEKHGITPKTIKKEIRGIIAATSAADEREAVKQHDLSKMSKKERDVFIEGMEHEMKEAAKALDFERAAELRDALLEIKAEG |
| 1D9X Chain:A ((415-595)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGLLDPTIDVR-P--TK--------GQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKE-------GFLRSERSLIQTIGRAARNA-NGHVIMYA-DTITKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDV--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47981 for 1249 contacts (-38.4/contact) +
2D Compatibility (PS) -18815 + (NN) -2437 + (LL) 36700
1D Compatibility (HY) -17600 + (ID) 5850
Total energy: -55983.0 ( -44.82 by residue)
QMean score : 0.494
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