Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIRVPATTANLGP-----GFDSCGLALTLYLTLDIGA-EADSWYIEHNIG--------GGI----P--HDETNVIIETALNLAPN-----LTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEEKVRIAAEIEG-------HPDNVAPAVLGNWVVGAKLDG-EDFYVRHLF-PDCALIAFIPKAE-LLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQ--LVPHLAQIRDVAKNQGAYAACLSGAG--PTVLVFAPRNLANKLQTSLQTLEIDADVLLLDVEGSGAEVFR |
| 1KKH Chain:A ((6-315)) | MIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDLNKSLGLNLNEIKNINPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASITIGTIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASITD-TSTITYKGILEIKNNKFRKIKGEFEEFLKNCKFLIVYAEKRKKKTAELVNEVAKIENKDEIFKEI--DKVIDEALKIKNKEDFGKLM-TKN-HELLKKLNISTPKLDRIVDIGNRFG-FGAKLTGAGGGGCVIILVNEEKEKELLKELNKE--DVRIFNCRM--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164860 for 2278 contacts (-72.4/contact) +
2D Compatibility (PS) -29222 + (NN) -6676 + (LL) 1212
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -210946.0 ( -92.60 by residue)
QMean score : 0.492
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