Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKAS--TDFV-DIEIDKPVPENHDLLVKIKAISINPVDTKQREAAKLSGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDVTRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIATQLAANTGLEVIATASRSETVEWTKSHGANYVINHREN-IPEQLEELG-FKKGVDFILCLHNTSAHWDEMQEAIRPQGKICSIVELTEPV---EMTLLKDKSAT-FSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
| 3JYN Chain:A ((2-325)) | AKRIQFSTVGGPEVLEYVD-FEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKVGDRVAYGTG--PLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVK---PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGK-KCPVVYDG-VGQDTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTL-G--SYA-NNAQNLQTMADELFDMLASGKLKVDGIEQY-AL--KDAAKAQIELSARRTTGSTILIP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JYN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149785 for 2843 contacts (-52.7/contact) +
2D Compatibility (PS) -34056 + (NN) -8294 + (LL) 932
1D Compatibility (HY) -10000 + (ID) 3650
Total energy: -204853.0 ( -72.06 by residue)
QMean score : 0.486
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