Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDGLIKIGHFVLSEKNIWEIR---RQVGMVFQNPDNQFVGATVQDDVAFGLENHGVPHDTMVERVESALNEVGMQSYALHEPARLSGGQKQRVAIAGVLALQPDVIILDEATSMLDPRGRAEVMETIRIMREQEDITVISITHDLDEVL-FADRVIVMNKGEIHSEGTPKEIFQQADAMREIG--LGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLNSNN |
| 2IT1 Chain:B ((4-259)) | -----IKLENIVKKFGNFT--ALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI-----YFDEKDVTELPPKDRNVGLVFQN-WALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPK-YKFVGGFLGNPPM-----NFVEAKVEDGKLVITEKSKL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151574 for 1941 contacts (-78.1/contact) +
2D Compatibility (PS) -26796 + (NN) -5009 + (LL) 2032
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -204197.0 ( -105.20 by residue)
QMean score : 0.429
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