Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPEKNIVLIGAGYAGVHAAKKLAKKYKKDKDVNITLIDRHSYHT-MMTELHEVAGGRVEPTAIQYDLRRLFNRTKVNLVTD-NVTHVDHDKKVVTTE-HGSYPFDYLVLGMGGEPNDFGTPGVGENGFTLWSWEDSVKLRNHIEETVTKASREQDVEKRKAMLTFVVCGSGFTGIEMVGELLEWKDRLAKDNKIDASEIKLVVVEAAPTILN-MLERRDADKAERYMVKKGIEIMKNAAIVEVKPESIVLKSGEELPTSTLIWTAGVRANS-DTKDYGMESARAGRLKVNQYMEAEGLKDVYVVGDLAYFEDEEGKPTPQIVEGAEQTALTAAKSIIVEMSGTGEKEPFQGKYHGVMVSIGAKYGVAHLGGMHLSGWFAILMKHMVNLYYFFGIRSGYYMWQYIMHEFFHIKDHRNIFRGWTSRYGNVLWVLPLRVYLGWFWIDEALSKIYGETTWDKVSITNLKPLFNGIGSDSWLTATTSKMPFEWLQTAATSGASQAAGDAAGAAATNVTTPILSHMPGWFQWIMELLMPNLDVALVMQKVVPFVELAIGLAMVVGLFTWLVSIGSAGFLVMFTLSAMLGWDKFWALPASIALLNGAGRTFGLDYWAVPWFQKHLGHWWYGKPRSVYRDK |
3KLJ Chain:A ((8-293)) | -KSTKILILGAGPAGFSAAKAALGK-----CDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDEC----------------KNKGKAFIIGGGILGIELAQAIIDS-------------GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKPNLDFIKDTEIA--SKRGILVNDHMET-SIKDIYACGDVAEFYG----KNPGLINIANKQGEVAGLNACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KLJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189153 for 2408 contacts (-78.6/contact) +
2D Compatibility (PS) -30101 + (NN) -7460 + (LL) 24788
1D Compatibility (HY) -14800 + (ID) 3400
Total energy: -220126.0 ( -91.41 by residue)
QMean score : 0.539
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