Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFFIDTANVEEIKKANRMGFISGVTTNPSLVAKEGRDFNEVIQEITSIVDGPISGEVVSLEADEMIAEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGIKTNVTLVFSATQALLAARAGATYVSPFLGRLDDIGDDGLVLIRDIADIFEIHGIPTEIISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK
3R8R Chain:C ((1-210))
MLFFVDTANIDEIREANELGILAGVTTNPSL-------FHDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKIAPNITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLADW-----
General information:
TITO was launched using:
RESULT:
Template:
3R8R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131938 for 1647 contacts (-80.1/contact) +
2D Compatibility (PS) -22033 + (NN) -6041 + (LL) 876
1D Compatibility (HY) -23200 + (ID) 6450
Total energy: -188786.0 ( -114.62 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3R8R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R8R-query.scw
PDB file :
Tito_Scwrl_3R8R.pdb
: