Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFL---AENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPG--AFRPGKYTLNETTTMLVLRRQYAELTGRP--------------LEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSR-PTFIAELKHHMESFGL-----RDTIIETATHKNQAGLLGAVYHFLQEENRHE
3VGL Chain:A ((3-313))-LTIGVDIGGTKIAAGVVDEEGRILSTFKVATPP-TAEGIVDAICAAVAGASEGHDVEAVGIGAAGYVDDKRATVLFAPNIDW-RHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLLCGCGSQGCWEQYASGRALVRYAKQRANATPENAAVLLGLGDGSVDGIEGKHISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLARQG-----


General information:
TITO was launched using:
RESULT:

Template: 3VGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -218202 for 2723 contacts (-80.1/contact) +
2D Compatibility (PS) -30899 + (NN) -18822 + (LL) 584
1D Compatibility (HY) -9200 + (ID) 4100
Total energy: -280639.0 ( -103.06 by residue)
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_3VGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VGL-query.scw
PDB file : Tito_Scwrl_3VGL.pdb: