Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------MYQVGSLVEMKKPHACVIKE-TGKKANQWKVLRVGADIKIQCTNCQHVIMM---SRYDFERKLKKVLQP
4CU5 Chain:A ((1-85))
MYKHTIVYDGEVDKISATVVGWGYNDGKILICDIKDYVPGQTQNLYVVGGGACEKISSITKEKFIMIKGNDRFDTLYKALDFINR
General information:
TITO was launched using:
RESULT:
Template:
4CU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19931 for 369 contacts (-54.0/contact) +
2D Compatibility (PS) -6718 + (NN) 477 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -28572.0 ( -77.43 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_4CU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CU5-query.scw
PDB file :
Tito_Scwrl_4CU5.pdb
: