Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKMIVGLGNPGSKYNDTKHNIGFMAVDRIVKDLDVNFTEDKNFKAEIGSDFINGEKIYFIKPTTFMNNSGIAVKALLTYYNISIKDMIIIYDDLDMEVGKIRFRQKGSAGGHNGIKSIIAHLGTQEFDRIKVGIGRPNGRMTVINHVLGKFDKNDEIMILNTLDKVDNAVNYYLQTNDFQKTMQKYNGLK
4OLJ Chain:A ((7-194))
-ISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLQDIVPHIGP-NFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKLLVQ-GQVPQAMNQINAYK
General information:
TITO was launched using:
RESULT:
Template:
4OLJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121859 for 1597 contacts (-76.3/contact) +
2D Compatibility (PS) -19658 + (NN) -4653 + (LL) 380
1D Compatibility (HY) -14800 + (ID) 3300
Total energy: -163890.0 ( -102.62 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4OLJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OLJ-query.scw
PDB file :
Tito_Scwrl_4OLJ.pdb
: