Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVLTFLLCSLYFVSIPAISTEEPLTLSQNRRYALTQTVVDKEMYFDAIPERPTTKIEISSFQDEALTITGETLVPNTLLSIVSLTINSNGIPVFTLSNGQFIKASREAIFNDLVSKQQSVSLDYWLKPSFVTYEAPYTNGVSEVKNNLKPYSRVHLVEQAETEHGIYYKTDSGFWISVEDLSVADNRMAKVQEVLLEKYNKDKYGIYIKQLNTQTVAGINIDRSMYSASIAKLATLYASQEQVKLGKLSLDSKFEYKDNVNQFPNSYDPSGSGKLEKKADHKLYTVKELLEATAKESDNVATNMLGYYVNNQYDSMFQTQVDTIS------GM---H-----W-DMKKRQISPQAAGKMMEAIYYQ-----N-------GDIVNYLSKTDFDNTRIPKNIP---VKVAHKIGDAYDYKHDAAIVYA--EQPFIMIIFTDKSS--------YDDITKIADDVYQVLK |
| 2WUQ Chain:A ((8-310)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRELRDALHE--GGLTGSFLVRDLYTGEELGIDPDTELPTASLVKLPLALATLERIRLGEVDGAQQIEVAPGRI------TTPGPTGLSRFRHPARVAVDDLLYLSTSVSDGTASDALFEITPPA---QVEQMVREWGFRDLTVRHSMREHRVPQLDVARANTGTARAFVDLLEALWAPVLTGP-ALPPEPAARLRELMAANLL-RHRLAPDFASDAATWSSKTGTLLNLRHEVGVVEHADGQVFAVAVLTESQVPADSQPGAEALMAQVARRLRDRLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75427 for 1899 contacts (-39.7/contact) +
2D Compatibility (PS) -23946 + (NN) -5402 + (LL) 13496
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -102429.0 ( -53.94 by residue)
QMean score : 0.377
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