Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETID--FTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYSAPITDKEV-TKYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPS--EDGKPDLEYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPVRTSFG-DL---YK----GDKRMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK |
| 2Z8F Chain:A ((12-406)) | --------------------------------DGGVVNITYMHRLPDS-E-----GMTLVNDIVAKWNKQHPDIQVKATKFDGKASDMIKKLETDVKSGEAPDLAQVGYAELPEVFTKGLLQDVTQYAEQ-YKNDFASGPYSL-VQVGGKAYGLPQDTGPLVYFYNKAEFEKLGITE-IPQ--TADEFIAAAKTAAAAGKY-IMSYQPD--EAGNMISGLAGASGGWYKVKGDSWVVNTETDGSKATADFYQQLLDAKAATTNPRWD-PSFDASIKDGSLIGTVAAAWEAPLFMTSSGGTGSGEWQVAQLGDWFGNAGKTGPDGGSAVAVLKN--SKHPKEAMEFLDWFNTQVP---DL-VSQGLVPAATTEDAETPSEWSTFFGGQDIMKEFKTANN-NMGDFTYMPGFSAVAAKMNETAAKATDGSGKVADIFSDAQTTSVDTLKNFGL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18311 for 3365 contacts (-5.4/contact) +
2D Compatibility (PS) -41505 + (NN) -18994 + (LL) 3180
1D Compatibility (HY) -2400 + (ID) 3250
Total energy: -81280.0 ( -24.15 by residue)
QMean score : 0.495
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