Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIIGVGKMASAIIQGLKQTQ----HDIVISGSCLE--RSKEIAERLDVTYAESHQSLINQADIIMLGIKPQLFEKVLLPLD----ITKPIISMAAGISLARLSQLTRS---DLPLIRIMPNINAQILQSCTAICYNNHVSDELRQLTKEITDSFGSSFDIAETNFDTFTALAGSSPAYIYLFIEALAKAGVKYGFPKEQALSIVGQTVLASSQNLLQGQNSTSDLIDNICSPGGTTIAGLLDLEKNGLTHSVISAIDATIEKAKKL |
| 2IZZ Chain:A ((23-290)) | MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR-KMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSSPGGATIHALHVLESGGFRSLLINAVEASCIRTREL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159784 for 1938 contacts (-82.4/contact) +
2D Compatibility (PS) -27431 + (NN) -6326 + (LL) 104
1D Compatibility (HY) -17600 + (ID) 3500
Total energy: -214537.0 ( -110.70 by residue)
QMean score : 0.518
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