Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------MIATINKNDLIALGFSEG---TSKRIIRQGKELLIARGFRVYQNKRIG-TIPASIATELLGFDVQNSSLSRG------
2LIU Chain:A ((1936-2034))
SGLVPRGSHMTPQVNQVNLSEIKQVLKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQILSSQGT
General information:
TITO was launched using:
RESULT:
Template:
2LIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2291 for 443 contacts (-5.2/contact) +
2D Compatibility (PS) -7165 + (NN) -887 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -11843.0 ( -26.73 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_2LIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LIU-query.scw
PDB file :
Tito_Scwrl_2LIU.pdb
: