Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVFASPSRYIQGKDALFQSIEHIKSLG-QTPLILCDDVVYNIVGERFLSYLQDDLLPH-RVSFNGEASDNEINRVVAVAKEKNSDLIIGLGGGKTIDSAKAIADKVNLPVVIAPTVASTDAPTSALSVIYTDEGAFEKYIFYSKNPDLVLVDTQVIAQAPKRLLASGIADGLATWVEARAVLQKNGIAMAGGRQTLAGVAIAQACERTLFNDSLQALAACDAKVVTKALENVIEANTLLSGLGFESAGLAAAHAIHNGFTALSGDIHHLTHGEKVAYGTLTQLFLENRP--K-----------EEIDRYINLYQAIGMPTTLAELHLGDATYEELLKVGQQATIEGETIHEMPFKISAEDVAAALLTVDRYVSNHQ |
| 3W5S Chain:A ((29-367)) | -----APARIVFGTGSSVGVAEEIRRLGLSRALVLSTPHQK-GDAEALAARLG-PLAAGVFSDAAMHTPVEVTKRAVEAYRAAGADCVVSLGGGSTTGLGKAIALRTDAPQIVIPTTY-AGSEVTPILGQTE-NGVKTTLRGPEILPEVVIYDAELTLGLPVGISMTSGLNAMAHAAEALYARDRN----------PIASMMAVEGLRAMIEALPGVRMEP---QDTKARETALYGA-WLCGTVLGAVGMSLHHKLCHTLGGSL----DLPHAETHAVLLPYTIAYVEQAVPDQLAPLAALVGGRAGTGLYDFAARLGAPASLAALGVGG---EDLDAMAELATAN---PYWCPRPVEKTAIRALLQRAFEGARP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161846 for 3008 contacts (-53.8/contact) +
2D Compatibility (PS) -34525 + (NN) -12651 + (LL) 1556
1D Compatibility (HY) 2000 + (ID) 3150
Total energy: -208616.0 ( -69.35 by residue)
QMean score : 0.557
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