Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTITTFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGN-----------I-GFPASE-----------------------------VV-QAADDKDILVMELSSFQLMG-VKEFRPHIAVITNLMPTHLDYHG-SFEDYVAAKWNIQNQMSSSDFLVLNFNQ-GI-SKELAKTTKATI------VPFSTTEKVDGAYVQDKQLFYKGENIMLVDDIGVPGSHNVENALATIAVAKL--AGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDSKSTNILATQKALSGFDN--TKVILIAGGLDRGNEFDELIPDIT-GLKHMVVLGES------ASRVKRAAQKAGVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFESLRGE |
| 3NRS Chain:A ((52-430)) | ---------------------------------------------------------------------------------------------------------------PKIFTVAGTNGKGTTCCTLEAILLAAGLRVGVYSSPHLLRYTERVRIQGQELSEAEHSHSFAQIEAGRGDISLTYFEFGTLSALQLFKQAKLDVVILEVGLGGRLDATNIVDSDVAAITSIALDHTDWLGYDRESIGREKAGVFRG---GKPAVVGEPDMPQSIADVAAELGAQLYRRDVAWKFSQ-----------NGWHWQCGERQL-TGLPVPN-VPLANAATALAVLHYSELPLSDEAIRQGLQAA-SLPGRFQVVSE--QPLLILD-VAHNPHAARYLVNRLAQVIGKVRAVVGMLS-DKDIAGTLACLSERVDEWYCAPLEGPRGASAGQLAEHLV----SARQFSDVETAWRQAMQDADTQDVVIVCGS---FHTVAHVMAALHL----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NRS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140990 for 2500 contacts (-56.4/contact) +
2D Compatibility (PS) -32192 + (NN) -14251 + (LL) 10036
1D Compatibility (HY) -13200 + (ID) 2850
Total energy: -193447.0 ( -77.38 by residue)
QMean score : 0.443
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