Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKKLLFSAAVLTMVAGSTVEPVAQFATGMSIVRAAEVSQERPAKTTVNIYKLQADSYKSEITSNGGIENKDGEVISNYAKLGDNVKGLQGVQFKRYKVKTDISVDELKKLTTVEAADAKVGTILEEGVSLPQKTNAQGLVVDALDSKSNVRYLYVEDLKNSPSNITKAYAVPFVLELPVANSTGTGFLSEINIYPKNVVTDEPKTDKDVKKLGQDDAGYTIGEEFKWFLKSTIPANLGDYEKFEITDKFADGLTYKS-VGKIKIGSKTLNRDEHYTIDEPTVDNQNTLKITFKPEKFKEIAELLKGMTLVKNQDALDKATANTDDAAFLEIPVASTINEKAVLGKAIENTFELQYDHTPDKADNPKPSNPPRKPEVHTGGKRFVKKDSTE-TQTL---GGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTAVTYKLKETKAPEGYVIPDKEIE----FTVSQTSYNTKPTDITVDSADATPDTIKNNKRPSIPNTGGIGTAIFVAIGAAVMAFAVKGMKRRTKDN |
| 2X9X Chain:A ((28-246)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVNHQVGDVVEYEIVTKIPAL-ANYATANWSDRMTEGLAFNKGTVKVTVDDV-ALEAGDYALTEV----ATGFDLKLTDAGLAKVND------------------QNAEKT--VKITYSATLNDKAIVEVPESNDVTFNYGNNPDHGNT-----PKPNKPNENGDLTLTKTWVDATGAPIPAGAEATFDLVNAQAGKV--V---------------------QTVTLTTDKNTVTVNGLDKNT---------EYKFVER-SIKGYSADYQEITTAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVNDKDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40383 for 1576 contacts (25.6/contact) +
2D Compatibility (PS) -21504 + (NN) 8486 + (LL) 17676
1D Compatibility (HY) -11600 + (ID) 2000
Total energy: 31441.0 ( 19.95 by residue)
QMean score : 0.334
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