Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVFPKHFLWGGAVAANQVEGAFRTDGKGLSVQD-------VLPNGGLGDFTAKPTPDNLKLEAIDFYHNYKNDIKLFAEMGFKVFRTSIAWSRIFPNGDDSAPNEAGLQFYDNLFDELLKYNIEPLVTLSHYETPLHLAKTYNGWADRRLIAFFEKFAQTVMERYKDKVKYWLTFNE--VNSILHMPFTSGAIMTDKSQLSPQELYQAIHHELVASARVTKLGRSINPNFKIGCMILAMPAYPMTSDPRDVLAARQFEQH-NLLFSDIHVRGKYPTYIQSYFKNNGIKIKFEEGDEEVLAQNTVDFLSFSYYMSVTQAYDFENYQSGQGNILGG--LTNPHLTTSEWGWQIDPIGLRLVLNQYYERY-QIPLFIVENGLGAKDQLIETLDGDYTVEDDYRIDYMNQHLVQVAKAIEDGVEIMGYTSWGCIDCVSMSTAQLSKRYGLIYVDRNDDGTGSLQRYKKKSFGWYQKVIKTNGQSLFEHHNR |
| 4PTW Chain:B ((6-445)) | --IFPEDFIWGAATSSYQIEGAFNEDGKGESIWDRFSHTPGKIENGDTGDI------------ACDHYHLYREDIELMKEIGIRSYRFSTSWPRILPEGKGRV-NQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQAL-QDKGGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAPGTKDFKTA----LQVAHHLLLSHGMAVDIFREEDLPGEIGITLNLTPAYPAGDSEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRD-IDFLGINYYSRMVV-----RHKPGD-NLFNAEVVKMEDRPSTEMGWEIYPQGLYDILVRVNKEYTDKPLYITENGAAFDDKLTE----EGKIHDEKRINYLGDHFKQAYKALKDGVPLRGYYVWSLMDNFEWAYG-YSKRFGLIYVDYENGN----RRFLKDSALWYREVIEKGQV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222653 for 3714 contacts (-59.9/contact) +
2D Compatibility (PS) -45211 + (NN) -9485 + (LL) 1628
1D Compatibility (HY) -26800 + (ID) 7500
Total energy: -310021.0 ( -83.47 by residue)
QMean score : 0.577
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