Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQSYSKNANHNMRRPVVKEEIVQYMRQHQK--QNNGCLAELEAFAKQEN--IPIIPHETATYFRFLMQTLQPKHILEIGTAIGFSALLMAENAP-EAKITTIDRNEEMIVLAKENFAKYDNHNQITLLEGDAVDVLQT------LDKSYDFVFMDSAKSKYIVFLPQVLKHLDVGGVVVLDDIFQGGDIAKPIDE-VRRGQRTIYRGLQRLFDSTLRHPDLTATLVPLGDGLLMIRKNAEHIVLED
1SUI Chain:A ((24-247))
----------------LQSDALYQYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRIK-------
General information:
TITO was launched using:
RESULT:
Template:
1SUI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133351 for 1688 contacts (-79.0/contact) +
2D Compatibility (PS) -23080 + (NN) -12723 + (LL) 1584
1D Compatibility (HY) -14000 + (ID) 2650
Total energy: -184220.0 ( -109.14 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1SUI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUI-query.scw
PDB file :
Tito_Scwrl_1SUI.pdb
: