Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKKT----QALIEQYSK-----SLVEVAIEHKIVEKIQQEVAALIDIFETS-------------ELEGVLSSLAVSHDEKQHFVKTLQTSCSTYLVNFL--------EVIVQNEREALLYPILKSVDQELIKVN----------------GQYPIQITTAVALSPEQKERLFDIAKTKLALPNGQL--VEHIDPSIVGGFVVNANNKVI-DASVRNQLHQFKMKLK- |
| 1G62 Chain:A ((1-224)) | MATRTQFENSNEIGVFSKLTNTYCLVAVGGSENFYSAFEAELGDAIPIVHTTIAGTRIIGRMTAGNRRGLLVPTQTTDQELQHLRNSLPD---SVKIQRVEERLSALGNVICCNDYVALVHPDIDRETEELISDVLGVEVFRQTISGNILVGSYCSLSNQGGLVHPQTSVQDQEELSSLLQV-PLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G62.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30997 for 1250 contacts (-24.8/contact) +
2D Compatibility (PS) -17876 + (NN) 3976 + (LL) -140
1D Compatibility (HY) -6400 + (ID) 1900
Total energy: -53337.0 ( -42.67 by residue)
QMean score : 0.345
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