Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKASHPKKIQKKLVQDLLSKKSLVGMALLGTVVQVCLTVYLPVLIGQAVDVVLSPHSMILLLPIMWKMIAVILANAIIQWINPLLYNRLIFHYVASLRKAVMEKLNLLPIAYLD--KRGIGDLISRVTTDTEQL---SNGLLMVFNQFFVGLLT-ILVTIFSMAKIDLLMLFLVLFLTPLSLFLARFIAKKSYHLYQNQTASRGRQTQFIEEMVSQESLIQAFSAQEESSNHFRTINQEYANFSQSAIFYSSTVNPSTRFINSLIYGFLAGIGALRIMSGAFSVGQ-LITFLNYVNQYTK------PFNDISSVLSEMQSALACAERLYSILEESSPNITG--TEKLDSSTVKGQIDFKNVVFGY--NKSKPLLNGINLHIPAGAKVAIVGPTGAGKSTLINLLMRFYEVDGGNILLDGKPITDYEPSQLRQEIGMVLQETWLKSATIHDNIAYANPK--ASRDEVIEAAKAANADFFIKQLPNGYDTYLEDAGDSLSQGQCQLLTIARIFLKLPRILILDEATSSIDTRTEVLVQEAFQMLMKGRTSFIIAHRLSTIQTADIILVMVSGEIVEVGNHSELIAQKGIYYQMQNAQK
4M1M Chain:A ((784-1270))------------------------------------------------------------------------------------------------LRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTRE---QKFETMYAQSLQIPYRNAMKKAHVFGITFS----FTQAMMYFSYAA--AFRF--GAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKT-PEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQA


General information:
TITO was launched using:
RESULT:

Template: 4M1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -245025 for 3253 contacts (-75.3/contact) +
2D Compatibility (PS) -49568 + (NN) -17901 + (LL) 10248
1D Compatibility (HY) -38000 + (ID) 8250
Total energy: -348496.0 ( -107.13 by residue)
QMean score : 0.396

(partial model without unconserved sides chains):
PDB file : Tito_4M1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M1M-query.scw
PDB file : Tito_Scwrl_4M1M.pdb: