Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIGQY--DITGKACIMGILNVTPDSFSDGGSYTTIDSALNQVGEMLEQGVAIVDIGGESTRPGAVFVTAEEEIKRVVPMIKAI-REVYPDLLLSIDTYKTEVAQAALDAGVHILNDVWSGLYDGKMLSLAAERNVPIILMHNQEEAVYQDIKKEVCEFLLERAERALEAGVSKDNIWIDPGFGFAKTEEQNLELLKGLEQVCDLGYPVLFGISRKRTVNYLLGGNREVTERDMGTAALSAWAIAKGCQIVRVHNVEVNKDIVTVISQLV
4D8Z Chain:B ((27-279))LRCGEYTLNLNEKTLIMGILN------SDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGE---------SVEEEIKRVVPMIQAVSKEV--KLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVL--DLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMI


General information:
TITO was launched using:
RESULT:

Template: 4D8Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173975 for 1981 contacts (-87.8/contact) +
2D Compatibility (PS) -26547 + (NN) -14079 + (LL) 212
1D Compatibility (HY) -22000 + (ID) 5950
Total energy: -242339.0 ( -122.33 by residue)
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_4D8Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D8Z-query.scw
PDB file : Tito_Scwrl_4D8Z.pdb: