Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAIIAKKAEQVELIAEKMKAAA--SIVVVDSRGL-TVEQDTNLRRSLRESDVEFKVIKN-SILI----RAAEKAGLEDLKELFVGPSAVAFSNEDVIAPAKVISDFAKDAEALEIKGGSVDGKFTSVE---------EINALAKLPNKEGMLSMLLSVL-QAP-VRNVAY--AVKAVAEKDEEVA------------------------------------------------ |
| 4NWB Chain:A ((5-250)) | KRARVYHLTQVNKRLFSNIRETIPKYQHCFVFSVDNMRNNYLKDVRHELNDCRIFFGKTKLMARALGTTPEEEQADGLHRLTRYLTGTVGLLFTNRD---PADIESYFSNLSQVDFARAGTVAPRTVTVPPGIVYSTGGEVPPEHDVPVSHTLEPELRRLGMPVRMIKGKVCLGEGYTICKEGEVLDSRQTRLLKLFSICLSEFKVSLLGYWSSASGEVTELEAGKTRPKREGNR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7628 for 870 contacts (-8.8/contact) +
2D Compatibility (PS) -16743 + (NN) 2298 + (LL) 540
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -26383.0 ( -30.33 by residue)
QMean score : 0.380
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