Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMETYTLSNTLNIPKIGFGTWQLTEGEEAYKAVTHALKVGYTHIDTAQIYGNEHSVGRAIRD----SGLARESIFLTTKIWNDKHDYHLAKASIDESLQKLGVDYIDLLLIHWPNPKALRENDAWKAGNAGTWKAMEEAYKEGKVKAIGVSNFMKHHLEALFETAEIKPMVNQIILAPGCAQEDLVRFCKGNDILLEAYSPFGTGAIFENESIKAIAEKYGKSVAQVALRWSLDNGFLPLPKSATPKNIEANLDIFDFQLNEDDITTLIQLDSGIK-PKDPDNVSF
3B3D Chain:B ((44-314))----TLHNGVEMPWFGLGVFQVEEGSELVNAVKTAIVHGYRSIDTAAIYGNEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGLDYLDLYLIHWPVEGKYKE----------AWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEAWSPLMQGQLLDHPVLADIAQTYNKSVAQIILRWDLQHGIITIPKSTKEHRIKENASVFDFELTQDDMNRIDALNENLRVGPDPDNFDF


General information:
TITO was launched using:
RESULT:

Template: 3B3D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128064 for 2239 contacts (-57.2/contact) +
2D Compatibility (PS) -29052 + (NN) -14431 + (LL) 528
1D Compatibility (HY) -30400 + (ID) 6100
Total energy: -207519.0 ( -92.68 by residue)
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_3B3D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B3D-query.scw
PDB file : Tito_Scwrl_3B3D.pdb: