Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIALINENS-QASKNTIIYKELKAVSDEKGFEVFNYGMYGKEEESQLTYVQNGLLTAILLNSGAADFVITGCGTGIGAMLACNSFPGVVCGFAADPVDAYLFSQVNGGNALSLPFAKGFGWGAELNLRYLFERLFEDEKGGGYPKERAVPEQRNARILSEIKQITYRDLLSVLKEIDQDFLKETISGEHFQEYFFANCQNQNIADYLKSVLD
3PH3 Chain:A ((21-159))
MKIGIGSDHGGYNLKREI-ADFLK----KRGYEVIDFGTHGN---ESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV-VG---LDLALDIVDTWLKAEFQGGR-HATRVGKIGEIEKKYS----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87234 for 1158 contacts (-75.3/contact) +
2D Compatibility (PS) -15535 + (NN) -11918 + (LL) 4992
1D Compatibility (HY) -3200 + (ID) 1950
Total energy: -114845.0 ( -99.18 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_3PH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PH3-query.scw
PDB file :
Tito_Scwrl_3PH3.pdb
: