Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFIFKRKKQVEMPLEKIPAH----IGIIMDGNGRWAKKRLKPRVMGHKAGMDALQEVTIAASGLGVKVLTVYAFSTENWSRPDDEVKFIMNLPVEFFDKYVPELDKNNVRVQVIGDTHKLPKATYDAMQRACLRTKHNSGLVLNFALNYGGRSEITNAIKEIAQDVLEAKLNPDDITEDLVANHLMTNSLPYLYRDPDLIIRTSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKDELHKAIVDYNQRHRRFGSV
3TH8 Chain:B ((14-239))-----------------PAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAF---------------MELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPV----DLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANR-------


General information:
TITO was launched using:
RESULT:

Template: 3TH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104022 for 1557 contacts (-66.8/contact) +
2D Compatibility (PS) -22602 + (NN) -12135 + (LL) 3024
1D Compatibility (HY) -16000 + (ID) 4600
Total energy: -156335.0 ( -100.41 by residue)
QMean score : 0.586

(partial model without unconserved sides chains):
PDB file : Tito_3TH8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TH8-query.scw
PDB file : Tito_Scwrl_3TH8.pdb: